ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 744.00 39.89 1.56 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 788.00 42.25 1.65 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 26.00 2.27 0.05 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 5.00 0.66 0.01 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 3055.00 55.71 6.41 74.35 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 38.00 0.00 0.08 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 40.00 52.63 0.08 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 1972.00 21.34 4.14 98.16 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 3.00 0.03 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 17.00 0.18 0.04 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 161.00 14.57 0.34 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 156.00 0.02 0.33 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 251.00 0.03 0.53 81.23 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 38.00 0.00 0.08 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 168.00 0.02 0.35 87.05 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 182585.00 21.13 382.92 50.44 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 64.00 0.01 0.13 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 951.00 75.42 1.99 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 59.00 0.00 0.12 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 1127.00 11.62 2.36 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 1242.00 12.80 2.60 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 8827.00 60.38 18.51 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 2.00 0.07 0.00 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 3.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 1236.00 0.03 2.59 22.88 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA metanephros (Tissue)