ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 19.81 0.21 0.04 68.3 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 111.00 39.36 0.23 100.0 SNORD115-34-201 snoRNA metanephros (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 91.00 14.56 0.19 100.0 RNU5E-1-201 snRNA metanephros (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 5.00 0.19 0.01 26.32 RNA5SP370-201 rRNA pseudogene metanephros (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 589.00 46.12 1.24 100.0 SNORA31-201 snoRNA metanephros (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 13.00 0.49 0.03 68.42 RNA5SP389-201 rRNA pseudogene metanephros (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 5.00 0.19 0.01 100.0 RNA5SP389-201 rRNA pseudogene metanephros (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 44.00 1.67 0.09 91.67 RNA5SP389-201 rRNA pseudogene metanephros (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 4.00 0.15 0.01 100.0 RNA5SP389-201 rRNA pseudogene metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 925.00 5.05 1.94 100.0 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 1923.00 10.50 4.03 78.55 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 934.10 5.10 1.96 41.13 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 920.00 5.02 1.93 74.92 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1119.00 6.11 2.35 81.44 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 521.00 2.84 1.09 61.15 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 115.00 0.63 0.24 100.0 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 557.00 3.04 1.17 68.85 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 605.00 3.30 1.27 42.25 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 558.82 3.05 1.17 67.98 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 322.00 1.76 0.68 46.0 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 305.00 1.67 0.64 100.0 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 1515.77 8.27 3.18 68.8 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 207.63 1.13 0.44 21.3 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 398.00 2.17 0.83 66.67 RNU5A-1-201 snRNA metanephros (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 10078.00 83.77 21.14 100.0 SNORD114-14-201 snoRNA metanephros (Tissue)