ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 399.00 25.54 0.84 100.0 ENST00000666735 lncRNA metanephros (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 19800.00 85.31 41.52 100.0 MEG8-242 lncRNA metanephros (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 5831.85 23.97 12.23 29.13 SNHG14-312 lncRNA metanephros (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 13804.52 56.74 28.95 68.94 SNHG14-312 lncRNA metanephros (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 148.00 0.61 0.31 100.0 SNHG14-312 lncRNA metanephros (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 1685.00 0.43 3.53 100.0 MEG8-244 lncRNA metanephros (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 1506.00 0.38 3.16 100.0 MEG8-244 lncRNA metanephros (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 387140.00 98.24 811.92 99.97 MEG8-244 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 1058.00 0.04 2.22 100.0 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 9.00 0.00 0.02 100.0 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 6326.00 0.24 13.27 98.91 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 383.89 0.01 0.81 46.99 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 2271.00 0.09 4.76 80.7 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 1697998.00 64.23 3561.08 98.94 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1323.00 0.05 2.77 80.08 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 98062.00 3.71 205.66 99.47 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 6050.00 0.23 12.69 100.0 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 351157.00 13.28 736.45 99.85 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 216.00 0.01 0.45 100.0 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 2062.00 0.08 4.32 100.0 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1056.00 0.04 2.21 100.0 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 1778.00 0.07 3.73 100.0 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 310.00 0.01 0.65 100.0 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 598.00 0.02 1.25 100.0 SNHG1-248 lncRNA metanephros (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 10377.00 0.39 21.76 100.0 SNHG1-248 lncRNA metanephros (Tissue)