ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 26000.00 78.93 54.53 93.53 MIR130A-201 miRNA metanephros (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 289806.00 98.37 607.79 99.05 MIRLET7F2-201 miRNA metanephros (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 842.00 71.36 1.77 100.0 MIR652-201 miRNA metanephros (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 273.00 63.79 0.57 100.0 MIR653-201 miRNA metanephros (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 2252.00 68.33 4.72 100.0 MIR140-201 miRNA metanephros (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 519.00 13.54 1.09 100.0 MIR106B-201 miRNA metanephros (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 1231.00 32.11 2.58 83.63 MIR106B-201 miRNA metanephros (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 63654.00 70.46 133.50 98.58 SNORD83A-201 snoRNA metanephros (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 23597.00 26.12 49.49 95.27 SNORD83A-201 snoRNA metanephros (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 1933.00 79.55 4.05 100.0 SNORD41-201 snoRNA metanephros (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 3.00 0.11 0.01 100.0 MT-TF-201 Mt tRNA metanephros (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 9.00 0.34 0.02 52.94 MT-TF-201 Mt tRNA metanephros (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 32.00 1.19 0.07 56.14 MT-TF-201 Mt tRNA metanephros (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 891.00 16.60 1.87 100.0 MT-TV-201 Mt tRNA metanephros (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 1201.00 8.53 2.52 85.85 MT-RNR2-201 Mt rRNA metanephros (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 122.00 0.87 0.26 100.0 MT-RNR2-201 Mt rRNA metanephros (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 56.00 0.40 0.12 100.0 MT-RNR2-201 Mt rRNA metanephros (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 48.00 0.34 0.10 100.0 MT-RNR2-201 Mt rRNA metanephros (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 452.00 3.21 0.95 100.0 MT-RNR2-201 Mt rRNA metanephros (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 6.00 0.04 0.01 100.0 MT-RNR2-201 Mt rRNA metanephros (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 1176.00 8.35 2.47 84.18 MT-RNR2-201 Mt rRNA metanephros (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 3532.00 14.64 7.41 83.8 MT-TI-201 Mt tRNA metanephros (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 6898.00 28.59 14.47 100.0 MT-TI-201 Mt tRNA metanephros (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 2246.00 24.43 4.71 82.66 MT-TQ-201 Mt tRNA metanephros (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 934.08 10.16 1.96 58.23 MT-TQ-201 Mt tRNA metanephros (Tissue)