ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 2331.00 4.57 3.07 100.0 LINC02739-203 lncRNA thyroid gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 1762.00 3.45 2.32 87.06 LINC02739-203 lncRNA thyroid gland (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 122.00 92.42 0.16 100.0 MIR124-1HG-216 lncRNA thyroid gland (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 1010.00 23.23 1.33 100.0 SNHG10-212 lncRNA thyroid gland (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 90391.31 31.19 119.23 32.88 SNHG19-202 lncRNA thyroid gland (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 183092.88 63.17 241.51 74.7 SNHG19-202 lncRNA thyroid gland (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 75.52 0.03 0.10 88.85 SNHG19-202 lncRNA thyroid gland (Tissue)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 4.32 0.00 0.01 54.04 SNHG19-202 lncRNA thyroid gland (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 3870.00 12.39 5.10 100.0 MIR222HG-206 lncRNA thyroid gland (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 17855.00 57.18 23.55 80.73 MIR222HG-206 lncRNA thyroid gland (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 320.00 1.02 0.42 100.0 MIR222HG-206 lncRNA thyroid gland (Tissue)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 0.95 2.70 0.00 18.9 MIR302CHG-205 lncRNA thyroid gland (Tissue)
ENST00000688371.3 ENST00000688371.3_313_333_+ 313–333 2.00 5.71 0.00 100.0 MIR302CHG-205 lncRNA thyroid gland (Tissue)
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 3.80 10.86 0.01 76.0 MIR302CHG-205 lncRNA thyroid gland (Tissue)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 3.00 8.57 0.00 100.0 MIR302CHG-205 lncRNA thyroid gland (Tissue)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 10.00 28.57 0.01 83.33 MIR302CHG-205 lncRNA thyroid gland (Tissue)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 9.00 25.71 0.01 100.0 MIR302CHG-205 lncRNA thyroid gland (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 5.00 2.58 0.01 100.0 RPSA-216 retained intron thyroid gland (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 7266.00 3.48 9.58 82.46 MIR99AHG-370 lncRNA thyroid gland (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 191189.00 91.70 252.19 98.04 MIR99AHG-370 lncRNA thyroid gland (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 880.00 94.32 1.16 100.0 HPS4-237 retained intron thyroid gland (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 2249.00 83.08 2.97 100.0 MEG8-253 lncRNA thyroid gland (Tissue)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 1669.00 12.53 2.20 100.0 MEG9-206 lncRNA thyroid gland (Tissue)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 3102.00 23.29 4.09 100.0 MEG9-206 lncRNA thyroid gland (Tissue)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 1506.00 11.31 1.99 100.0 MEG9-206 lncRNA thyroid gland (Tissue)