ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 160281.00 90.70 211.42 100.0 SNORD90-201 snoRNA thyroid gland (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 8182.00 1.39 10.79 100.0 SNORD69-201 snoRNA thyroid gland (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 541352.00 92.25 714.08 100.0 SNORD69-201 snoRNA thyroid gland (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 9406.00 1.60 12.41 100.0 SNORD69-201 snoRNA thyroid gland (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 4061.00 0.69 5.36 100.0 SNORD69-201 snoRNA thyroid gland (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 10968.00 49.21 14.47 65.71 SNORD70-201 snoRNA thyroid gland (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 38189.00 74.99 50.37 82.79 B4GALNT2-202 protein coding thyroid gland (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 642.00 1.26 0.85 100.0 B4GALNT2-202 protein coding thyroid gland (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 2909.00 89.10 3.84 100.0 NDE1-202 protein coding thyroid gland (Tissue)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 28424.00 93.82 37.49 100.0 MIR208B-201 miRNA thyroid gland (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 3168.00 61.79 4.18 100.0 MIR450B-201 miRNA thyroid gland (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 1088.00 52.61 1.44 100.0 MIR887-201 miRNA thyroid gland (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 24183.00 89.16 31.90 100.0 MIR889-201 miRNA thyroid gland (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 8174.00 80.62 10.78 100.0 SNORD111-201 snoRNA thyroid gland (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 9968.00 67.42 13.15 84.2 SNORD88A-201 snoRNA thyroid gland (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 432.00 93.71 0.57 100.0 MIR548K-201 miRNA thyroid gland (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 419.00 58.19 0.55 100.0 MIR320B2-201 miRNA thyroid gland (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 176.00 86.27 0.23 100.0 MIR1271-201 miRNA thyroid gland (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 730.00 0.28 0.96 100.0 SNORD100-201 snoRNA thyroid gland (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 245563.00 93.53 323.91 100.0 SNORD100-201 snoRNA thyroid gland (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 3670.00 1.40 4.84 100.0 SNORD100-201 snoRNA thyroid gland (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 1153.00 0.44 1.52 100.0 SNORD100-201 snoRNA thyroid gland (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 7440.00 69.22 9.81 100.0 SNORD111B-201 snoRNA thyroid gland (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 3888.00 42.33 5.13 100.0 RNU2-36P-201 snRNA thyroid gland (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 35.00 0.38 0.05 100.0 RNU2-36P-201 snRNA thyroid gland (Tissue)