ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 2568.00 49.34 5.71 100.0 SNORD14C-201 snoRNA thyroid gland (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 331.00 53.04 0.74 100.0 SNORD115-44-201 snoRNA thyroid gland (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 43.00 2.08 0.10 100.0 RNA5SP77-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 33146.00 52.34 73.68 99.61 SNORD114-22-201 snoRNA thyroid gland (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 28507.00 45.01 63.37 100.0 SNORD114-22-201 snoRNA thyroid gland (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 35755.00 86.73 79.48 100.0 SNORD6-201 snoRNA thyroid gland (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1942.00 4.71 4.32 100.0 SNORD6-201 snoRNA thyroid gland (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 1728.00 9.71 3.84 100.0 RNY3-201 misc RNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 13080.00 6.38 29.07 92.29 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 13675.83 6.67 30.40 48.43 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 14283.64 6.97 31.75 50.58 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 720.00 0.35 1.60 100.0 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 937.00 0.46 2.08 100.0 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 144082.00 70.26 320.26 97.56 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 604.00 0.29 1.34 100.0 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 93911.00 90.18 208.74 92.37 MIR146B-201 miRNA thyroid gland (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 153.00 39.64 0.34 100.0 SNHG20-201 lncRNA thyroid gland (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 121.00 12.19 0.27 100.0 ATP5MK-205 protein coding thyroid gland (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 252.00 25.38 0.56 100.0 ATP5MK-205 protein coding thyroid gland (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 6.00 5.00 0.01 100.0 LINC01556-201 lncRNA thyroid gland (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 23.00 45.10 0.05 100.0 ATAD3A-202 protein coding thyroid gland (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 8574.00 58.13 19.06 76.47 TMC5-202 protein coding thyroid gland (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 26.00 61.90 0.06 100.0 ZMYM2-203 protein coding thyroid gland (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 1752.00 10.68 3.89 100.0 RNVU1-7-201 snRNA thyroid gland (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 5866.00 46.76 13.04 100.0 SNORD24-201 snoRNA thyroid gland (Tissue)