ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 859.00 88.28 1.91 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 219.00 19.73 0.49 91.25 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 251.00 92.28 0.56 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 63.00 0.22 0.14 29.3 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 152.00 0.53 0.34 70.7 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 10833.00 37.79 24.08 62.98 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 4837.71 41.62 10.75 59.7 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 918.00 7.90 2.04 78.73 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 3607.51 31.04 8.02 48.25 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 88017.00 88.80 195.64 95.29 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 196.00 11.18 0.44 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 2890.00 35.35 6.42 85.48 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 548.00 0.07 1.22 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 144.00 0.08 0.32 50.88 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 125.00 24.56 0.28 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 37.00 2.02 0.08 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 840102.00 97.79 1867.37 99.79 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 404.00 2.24 0.90 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 10102.00 55.92 22.45 92.7 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 1184.00 57.28 2.63 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 1490.00 55.43 3.31 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 509.00 5.46 1.13 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 38530.00 95.15 85.64 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 5782.00 93.89 12.85 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 479.00 12.15 1.06 95.8 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA thyroid gland (Tissue)