ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 10928.00 11.55 24.29 99.14 ENST00000823279 lncRNA thyroid gland (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 2996.22 3.17 6.66 36.85 ENST00000823279 lncRNA thyroid gland (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 3189.54 3.37 7.09 42.39 ENST00000823279 lncRNA thyroid gland (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 6829.00 7.22 15.18 79.87 ENST00000823279 lncRNA thyroid gland (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 9408.15 9.94 20.91 52.04 ENST00000823279 lncRNA thyroid gland (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 7743.61 8.18 17.21 40.96 ENST00000823801 lncRNA thyroid gland (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 4871.00 37.72 10.83 43.75 ENST00000827714 lncRNA thyroid gland (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 6262.00 48.49 13.92 56.25 ENST00000827714 lncRNA thyroid gland (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 2056.00 3.44 4.57 100.0 GAS5-377 lncRNA thyroid gland (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 1166.00 1.95 2.59 100.0 GAS5-377 lncRNA thyroid gland (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 2304.00 3.86 5.12 100.0 GAS5-377 lncRNA thyroid gland (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 48287.00 80.85 107.33 100.0 GAS5-377 lncRNA thyroid gland (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 34.00 87.18 0.08 100.0 MIR205HG-245 lncRNA thyroid gland (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 679.00 22.73 1.51 100.0 TAF12-DT-204 lncRNA thyroid gland (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 336606.00 92.64 748.21 99.58 ZFAS1-238 lncRNA thyroid gland (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 1536.00 0.42 3.41 100.0 ZFAS1-238 lncRNA thyroid gland (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 6248.00 1.72 13.89 100.0 ZFAS1-238 lncRNA thyroid gland (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1898.00 0.52 4.22 100.0 ZFAS1-238 lncRNA thyroid gland (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 7596.00 7.81 16.88 100.0 ZFAS1-242 lncRNA thyroid gland (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 85018.00 87.36 188.98 100.0 ZFAS1-242 lncRNA thyroid gland (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 121.00 33.15 0.27 100.0 ENST00000837997 lncRNA thyroid gland (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 23.00 6.30 0.05 100.0 ENST00000837997 lncRNA thyroid gland (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 5591.00 71.29 12.43 78.65 ENST00000839036 lncRNA thyroid gland (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 61.00 13.50 0.14 100.0 ENST00000849527 lncRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 25209.00 74.43 56.03 88.05 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA thyroid gland (Tissue)