ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 43.92 0.19 0.10 72.0 RNA5S12-201 rRNA thyroid gland (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 6867.00 42.84 15.26 100.0 Y_RNA.14-201 misc RNA thyroid gland (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 203.00 36.25 0.45 100.0 SNORD115-34-201 snoRNA thyroid gland (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 790.00 28.81 1.76 100.0 RNU5E-1-201 snRNA thyroid gland (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 1.00 0.02 0.00 14.29 RNA5SP370-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 168.00 18.34 0.37 100.0 SNORA31-201 snoRNA thyroid gland (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 5.00 0.08 0.01 100.0 RNA5SP389-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 11.00 0.17 0.02 68.75 RNA5SP389-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 13.00 0.20 0.03 100.0 RNA5SP389-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 21.00 0.32 0.05 63.64 RNA5SP389-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 12335.00 12.28 27.42 75.81 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 1945.00 1.94 4.32 100.0 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 9877.42 9.83 21.96 37.58 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 6584.00 6.56 14.63 76.41 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 3207.00 3.19 7.13 56.24 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 508.00 0.51 1.13 100.0 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 1666.00 1.66 3.70 43.95 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 5439.00 5.42 12.09 43.92 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 1561.56 1.55 3.47 47.84 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 3357.00 3.34 7.46 53.95 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 727.00 0.72 1.62 100.0 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 17330.37 17.26 38.52 69.82 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 1735.07 1.73 3.86 38.1 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 3131.00 3.12 6.96 85.99 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 6244.00 6.22 13.88 79.17 RNU5A-1-201 snRNA thyroid gland (Tissue)