ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1036.00 0.04 2.30 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 3914.00 0.15 8.70 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 624.00 0.02 1.39 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 1153.00 0.04 2.56 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 19452.00 0.76 43.24 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 152.00 0.01 0.34 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 3482.00 0.14 7.74 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 70393.00 2.73 156.47 63.96 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 3213.00 0.12 7.14 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 458114.00 17.80 1018.29 97.05 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 3585.00 0.14 7.97 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 1090.00 0.04 2.42 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 7.00 0.00 0.02 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 289247.00 11.24 642.94 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 3215.00 0.12 7.15 76.71 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 1096.59 0.04 2.44 55.22 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 1107.00 0.04 2.46 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 3605.00 0.14 8.01 63.95 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1992.00 0.08 4.43 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 4370.00 0.17 9.71 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 330.00 0.01 0.73 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 52503.00 34.23 116.70 100.0 SNHG14-315 lncRNA thyroid gland (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 34215.00 22.31 76.05 86.14 SNHG14-315 lncRNA thyroid gland (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 40372.00 26.32 89.74 82.4 SNHG14-315 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 103.00 0.03 0.23 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)