ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 765302.45 80.10 1701.11 85.84 C19orf48P-203 retained intron thyroid gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 183029.53 19.16 406.84 19.43 C19orf48P-203 retained intron thyroid gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 1621.00 0.17 3.60 82.58 C19orf48P-203 retained intron thyroid gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 67.00 0.01 0.15 100.0 C19orf48P-203 retained intron thyroid gland (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 10.00 0.00 0.02 100.0 C19orf48P-203 retained intron thyroid gland (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 12.00 44.44 0.03 100.0 ENST00000597420 lncRNA thyroid gland (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 145.00 2.78 0.32 100.0 RPS11-206 retained intron thyroid gland (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 4427.00 84.91 9.84 100.0 RPS11-206 retained intron thyroid gland (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 384058.00 55.86 853.68 57.71 CARMN-209 lncRNA thyroid gland (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 2657.00 34.07 5.91 100.0 ENST00000602478 lncRNA thyroid gland (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 2.00 12.50 0.00 100.0 PPFIA1P1-201 processed pseudogene thyroid gland (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 748.00 20.59 1.66 100.0 SNORD114-21-201 snoRNA thyroid gland (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 1832.00 50.43 4.07 100.0 SNORD114-21-201 snoRNA thyroid gland (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 121.00 28.14 0.27 100.0 SNORD115-40-201 snoRNA thyroid gland (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 39226.00 98.08 87.19 100.0 MIR98-201 miRNA thyroid gland (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 10519.00 96.38 23.38 100.0 SNORD113-5-201 snoRNA thyroid gland (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 9270.00 96.04 20.61 100.0 MIR15A-201 miRNA thyroid gland (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 755.00 80.49 1.68 100.0 MIR376C-201 miRNA thyroid gland (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 1023.00 43.11 2.27 100.0 SNHG21-206 retained intron thyroid gland (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 177.00 17.25 0.39 100.0 SNORD11B-201 snoRNA thyroid gland (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 8772.00 78.51 19.50 100.0 SNORD91B-201 snoRNA thyroid gland (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 7.00 25.00 0.02 100.0 MIR219A2HG-201 lncRNA thyroid gland (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 15274.00 61.47 33.95 74.37 SNORD91A-201 snoRNA thyroid gland (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 122228.00 48.00 271.69 97.51 MIR486-1-201 miRNA thyroid gland (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 61501.00 33.95 136.70 74.15 NOP56-219 retained intron thyroid gland (Tissue)