ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 796.00 0.09 1.77 100.0 RPL21-209 retained intron thyroid gland (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 724.00 25.91 1.61 100.0 GABRE-209 retained intron thyroid gland (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 21.00 0.00 0.05 100.0 RPL13A-212 retained intron thyroid gland (Tissue)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 2692.00 0.40 5.98 100.0 RPL13A-212 retained intron thyroid gland (Tissue)
ENST00000488946.1 ENST00000488946.1_804_886_+ 804–886 52774.00 7.79 117.31 75.97 RPL13A-212 retained intron thyroid gland (Tissue)
ENST00000488946.1 ENST00000488946.1_1364_1441_+ 1364–1441 4250.00 0.63 9.45 53.96 RPL13A-212 retained intron thyroid gland (Tissue)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 601.00 0.09 1.34 100.0 RPL13A-212 retained intron thyroid gland (Tissue)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 519406.00 76.63 1154.53 97.76 RPL13A-212 retained intron thyroid gland (Tissue)
ENST00000488946.1 ENST00000488946.1_148_235_+ 148–235 15.00 0.00 0.03 100.0 RPL13A-212 retained intron thyroid gland (Tissue)
ENST00000488946.1 ENST00000488946.1_1363_1444_+ 1363–1444 12824.00 1.89 28.51 100.0 RPL13A-212 retained intron thyroid gland (Tissue)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 2666.00 13.29 5.93 100.0 RPL7A-207 protein coding CDS not defined thyroid gland (Tissue)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 185.00 0.92 0.41 100.0 RPL7A-207 protein coding CDS not defined thyroid gland (Tissue)
ENST00000489392.1 ENST00000489392.1_116_191_+ 116–191 10680.00 53.26 23.74 86.96 RPL7A-207 protein coding CDS not defined thyroid gland (Tissue)
ENST00000490232.3 ENST00000490232.3_219_300_+ 219–300 3659.00 4.83 8.13 100.0 RN7SL2-201 misc RNA thyroid gland (Tissue)
ENST00000490232.3 ENST00000490232.3_229_300_+ 229–300 1161.00 1.53 2.58 39.71 RN7SL2-201 misc RNA thyroid gland (Tissue)
ENST00000493449.5 ENST00000493449.5_96_109_+ 96–109 5.00 16.67 0.01 100.0 RGS11-208 retained intron thyroid gland (Tissue)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 38932.00 61.64 86.54 75.75 NOP56-217 protein coding CDS not defined thyroid gland (Tissue)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 6016.00 9.53 13.37 84.92 NOP56-217 protein coding CDS not defined thyroid gland (Tissue)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 613.00 0.29 1.36 34.19 RABGGTB-213 protein coding CDS not defined thyroid gland (Tissue)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 939.00 0.45 2.09 100.0 RABGGTB-213 protein coding CDS not defined thyroid gland (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 798.00 0.38 1.77 100.0 RABGGTB-213 protein coding CDS not defined thyroid gland (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 1180.00 0.56 2.62 65.81 RABGGTB-213 protein coding CDS not defined thyroid gland (Tissue)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 110899.00 52.86 246.51 91.04 RABGGTB-213 protein coding CDS not defined thyroid gland (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 70879.00 33.78 157.55 97.5 RABGGTB-213 protein coding CDS not defined thyroid gland (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 123.00 0.06 0.27 100.0 RABGGTB-213 protein coding CDS not defined thyroid gland (Tissue)