ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 2819.00 32.78 6.27 100.0 RNU2-36P-201 snRNA thyroid gland (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 57.00 0.66 0.13 100.0 RNU2-36P-201 snRNA thyroid gland (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 638.00 0.65 1.42 100.0 SNORD19C-201 snoRNA thyroid gland (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 94007.00 95.47 208.96 99.29 SNORD19C-201 snoRNA thyroid gland (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 1359.00 0.71 3.02 100.0 SNORD12B-201 snoRNA thyroid gland (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 49.00 0.03 0.11 100.0 SNORD12B-201 snoRNA thyroid gland (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 179953.00 93.67 400.00 97.89 SNORD12B-201 snoRNA thyroid gland (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 4795.00 35.78 10.66 100.0 Y_RNA.609-201 misc RNA thyroid gland (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 760.00 37.62 1.69 100.0 Y_RNA.612-201 misc RNA thyroid gland (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 268737.00 94.76 597.35 98.79 SNORD71-201 snoRNA thyroid gland (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 5956.00 2.10 13.24 100.0 SNORD71-201 snoRNA thyroid gland (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 746.00 0.26 1.66 100.0 SNORD71-201 snoRNA thyroid gland (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 7165.00 79.08 15.93 94.46 MIR194-2HG-201 lncRNA thyroid gland (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 941.00 10.39 2.09 56.28 MIR194-2HG-201 lncRNA thyroid gland (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 2.00 0.07 0.00 100.0 LINC01783-201 lncRNA thyroid gland (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 44.00 50.57 0.10 100.0 RPS7P15-201 processed pseudogene thyroid gland (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 1433.00 11.32 3.19 100.0 SNORD62B-201 snoRNA thyroid gland (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 2356.00 18.61 5.24 100.0 SNORD62B-201 snoRNA thyroid gland (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 1009.00 7.97 2.24 75.41 SNORD62B-201 snoRNA thyroid gland (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 2083.00 16.45 4.63 100.0 SNORD62B-201 snoRNA thyroid gland (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 144.00 1.14 0.32 100.0 SNORD62B-201 snoRNA thyroid gland (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 42.00 84.00 0.09 100.0 MRPL32-203 nonsense mediated decay thyroid gland (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 548.00 93.04 1.22 100.0 ENST00000436739 lncRNA thyroid gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 197.00 0.69 0.44 100.0 TMEM107-204 protein coding thyroid gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 687.00 2.40 1.53 61.73 TMEM107-204 protein coding thyroid gland (Tissue)