ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 28767.00 79.08 63.94 82.31 MIR100-201 miRNA thyroid gland (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 96.00 83.48 0.21 100.0 MIR301A-201 miRNA thyroid gland (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 2581.00 10.88 5.74 21.33 MIR130A-201 miRNA thyroid gland (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 20830.00 87.78 46.30 93.29 MIR130A-201 miRNA thyroid gland (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 546448.00 97.66 1214.64 98.93 MIRLET7F2-201 miRNA thyroid gland (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 1215.00 65.89 2.70 100.0 MIR652-201 miRNA thyroid gland (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 22.00 62.86 0.05 100.0 MIR653-201 miRNA thyroid gland (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 3023.00 64.93 6.72 100.0 MIR140-201 miRNA thyroid gland (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 2335.00 44.04 5.19 72.81 MIR106B-201 miRNA thyroid gland (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 484.00 9.13 1.08 100.0 MIR106B-201 miRNA thyroid gland (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 25323.00 17.95 56.29 92.89 SNORD83A-201 snoRNA thyroid gland (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 109223.00 77.42 242.78 98.7 SNORD83A-201 snoRNA thyroid gland (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 3365.00 83.31 7.48 100.0 SNORD41-201 snoRNA thyroid gland (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 53.00 0.26 0.12 63.1 MT-TF-201 Mt tRNA thyroid gland (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 270.00 1.32 0.60 65.69 MT-TF-201 Mt tRNA thyroid gland (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 27.00 0.13 0.06 100.0 MT-TF-201 Mt tRNA thyroid gland (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 6632.00 4.58 14.74 100.0 MT-TV-201 Mt tRNA thyroid gland (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 3984.00 3.92 8.86 100.0 MT-RNR2-201 Mt rRNA thyroid gland (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 3437.00 3.38 7.64 86.34 MT-RNR2-201 Mt rRNA thyroid gland (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 218.00 0.21 0.48 100.0 MT-RNR2-201 Mt rRNA thyroid gland (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 196.00 0.19 0.44 100.0 MT-RNR2-201 Mt rRNA thyroid gland (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 3293.00 3.24 7.32 83.28 MT-RNR2-201 Mt rRNA thyroid gland (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 209.00 0.21 0.46 100.0 MT-RNR2-201 Mt rRNA thyroid gland (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 3.00 0.00 0.01 100.0 MT-RNR2-201 Mt rRNA thyroid gland (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 112560.00 24.31 250.20 100.0 MT-TI-201 Mt tRNA thyroid gland (Tissue)