ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 1216.00 2.47 1.83 100.0 7SK.1-201 misc RNA lung (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 1697.00 58.30 2.55 100.0 SNORD14C-201 snoRNA lung (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 2512.00 57.65 3.78 100.0 SNORD115-44-201 snoRNA lung (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 41.00 10.54 0.06 100.0 RNA5SP77-201 rRNA pseudogene lung (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 19032.00 38.44 28.65 100.0 SNORD114-22-201 snoRNA lung (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 28617.00 57.80 43.08 98.26 SNORD114-22-201 snoRNA lung (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 2619.00 7.80 3.94 100.0 SNORD6-201 snoRNA lung (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 28423.00 84.66 42.79 100.0 SNORD6-201 snoRNA lung (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 1794.00 11.13 2.70 100.0 RNY3-201 misc RNA lung (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 55571.00 42.19 83.66 98.25 SNORD82-201 snoRNA lung (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 1540.00 1.17 2.32 100.0 SNORD82-201 snoRNA lung (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 22082.00 16.76 33.24 91.57 SNORD82-201 snoRNA lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 20907.38 15.87 31.48 53.02 SNORD82-201 snoRNA lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 17740.40 13.47 26.71 44.99 SNORD82-201 snoRNA lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 1153.00 0.88 1.74 100.0 SNORD82-201 snoRNA lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 505.00 0.38 0.76 100.0 SNORD82-201 snoRNA lung (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 83788.00 93.90 126.14 95.61 MIR146B-201 miRNA lung (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 40.00 21.62 0.06 100.0 SNHG20-201 lncRNA lung (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 121.00 10.68 0.18 100.0 ATP5MK-205 protein coding lung (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 273.00 24.10 0.41 100.0 ATP5MK-205 protein coding lung (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 23.00 22.55 0.03 100.0 LINC01556-201 lncRNA lung (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 25.00 21.55 0.04 100.0 ATAD3A-202 protein coding lung (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 6599.00 64.26 9.93 80.65 TMC5-202 protein coding lung (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 94.00 71.76 0.14 100.0 ZMYM2-203 protein coding lung (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 910.00 7.85 1.37 100.0 RNVU1-7-201 snRNA lung (Tissue)