ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 81.00 0.03 0.12 52.6 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 286.00 9.11 0.43 32.57 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 817.00 96.12 1.23 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 152.00 29.98 0.23 96.2 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 330.00 92.96 0.50 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 924.00 3.58 1.39 91.94 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 81.00 0.31 0.12 8.06 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 5162.00 20.00 7.77 62.74 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 5084.19 39.38 7.65 48.43 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 221.00 1.71 0.33 85.66 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 6204.93 48.06 9.34 54.8 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 41915.00 88.43 63.10 91.44 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 56.00 4.55 0.08 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1675.00 28.04 2.52 67.87 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 27.00 0.01 0.04 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 233.00 0.21 0.35 49.16 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 355.00 57.91 0.53 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 445.00 34.15 0.67 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 315866.00 98.36 475.53 99.91 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 176.00 3.67 0.26 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 2085.00 43.49 3.14 80.53 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 343.00 63.64 0.52 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 128.00 42.95 0.19 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 331.00 12.56 0.50 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 49027.00 97.86 73.81 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA lung (Tissue)