ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 89.00 0.01 0.13 100.0 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 4352.00 0.70 6.55 100.0 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 191389.69 30.91 288.13 39.11 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 1045.00 0.17 1.57 100.0 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 1455.00 0.23 2.19 100.0 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 339313.32 54.79 510.83 64.21 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 29043.00 4.69 43.72 86.92 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 1510.00 0.24 2.27 100.0 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 5861.00 0.95 8.82 100.0 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 6.00 0.00 0.01 100.0 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 14856.00 2.40 22.37 98.36 SNHG5-273 lncRNA lung (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 5708.00 17.52 8.59 66.11 SNHG14-323 lncRNA lung (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 270165.00 94.77 406.73 98.9 MEG8-251 lncRNA lung (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 834.00 0.29 1.26 44.03 MEG8-251 lncRNA lung (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 3734.00 1.31 5.62 80.09 MEG8-251 lncRNA lung (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 595.00 0.21 0.90 100.0 MEG8-251 lncRNA lung (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 1268.00 0.44 1.91 67.84 MEG8-251 lncRNA lung (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 64744.00 56.23 97.47 85.9 SNHG14-336 lncRNA lung (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 44280.00 38.45 66.66 60.0 SNHG14-336 lncRNA lung (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 35232.00 70.83 53.04 94.69 SNHG14-341 lncRNA lung (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 376.00 12.07 0.57 100.0 NCL-211 retained intron lung (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 1450.00 22.73 2.18 100.0 FMN2-209 protein coding CDS not defined lung (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 6.00 0.12 0.01 100.0 LINC02739-203 lncRNA lung (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 369.00 7.40 0.56 71.37 LINC02739-203 lncRNA lung (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 409.00 8.20 0.62 100.0 LINC02739-203 lncRNA lung (Tissue)