ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 14468.00 33.07 21.78 100.0 SNHG14-303 lncRNA lung (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 223.00 1.72 0.34 100.0 SNHG14-306 lncRNA lung (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 258.00 1.99 0.39 100.0 SNHG14-306 lncRNA lung (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 10064.00 77.60 15.15 98.83 SNHG14-306 lncRNA lung (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 286.00 2.21 0.43 100.0 SNHG14-306 lncRNA lung (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 122.00 0.92 0.18 100.0 ENST00000666735 lncRNA lung (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 4106.00 30.95 6.18 100.0 ENST00000666735 lncRNA lung (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 7232.00 82.29 10.89 100.0 MEG8-242 lncRNA lung (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 24684.43 20.92 37.16 25.29 SNHG14-312 lncRNA lung (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 69719.40 59.08 104.96 71.43 SNHG14-312 lncRNA lung (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 2712.00 2.30 4.08 100.0 SNHG14-312 lncRNA lung (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 324.00 0.36 0.49 100.0 MEG8-244 lncRNA lung (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 840.00 0.94 1.26 100.0 MEG8-244 lncRNA lung (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 86142.00 96.91 129.68 99.92 MEG8-244 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 2517.00 0.06 3.79 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 19.00 0.00 0.03 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 13354.00 0.32 20.10 98.82 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 964.88 0.02 1.45 42.79 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 4771.00 0.11 7.18 91.22 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 2347974.00 55.61 3534.80 98.38 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1950.00 0.05 2.94 73.67 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 165087.00 3.91 248.53 99.49 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 11248.00 0.27 16.93 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 489632.00 11.60 737.13 99.65 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 595.00 0.01 0.90 100.0 SNHG1-248 lncRNA lung (Tissue)