ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 243.00 0.04 0.37 13.84 MT-TE-201 Mt tRNA lung (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 2640.00 0.48 3.97 100.0 MT-TE-201 Mt tRNA lung (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 473719.00 86.88 713.17 91.8 MT-TE-201 Mt tRNA lung (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 1513.00 0.28 2.28 90.17 MT-TE-201 Mt tRNA lung (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 138.00 0.03 0.21 100.0 MT-TE-201 Mt tRNA lung (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 6.00 60.00 0.01 100.0 MIR196A1-201 miRNA lung (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 1256.00 27.23 1.89 100.0 MT-RNR1-201 Mt rRNA lung (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 3719.00 83.86 5.60 100.0 MIR454-201 miRNA lung (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 1711.00 68.83 2.58 100.0 MIR501-201 miRNA lung (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 6217.00 91.76 9.36 100.0 MIR769-201 miRNA lung (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 47.00 68.12 0.07 100.0 KRTAP19-1-201 protein coding lung (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 296.00 29.48 0.45 100.0 MIR708-201 miRNA lung (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 42.00 77.78 0.06 100.0 MIR509-3-201 miRNA lung (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 55.00 47.01 0.08 100.0 MIR543-201 miRNA lung (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 147.00 96.71 0.22 100.0 MIR301B-201 miRNA lung (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 3585.00 56.85 5.40 79.76 RNU1-82P-201 snRNA lung (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 9488.00 34.89 14.28 100.0 SNORD66-201 snoRNA lung (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 1577.00 5.80 2.37 100.0 SNORD66-201 snoRNA lung (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 60.00 0.22 0.09 100.0 SNORD66-201 snoRNA lung (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 6426.00 23.63 9.67 78.94 SNORD66-201 snoRNA lung (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 230.00 75.41 0.35 100.0 U3.17-201 snoRNA lung (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 18449.00 75.74 27.77 100.0 SNORD17-201 snoRNA lung (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 172.00 53.09 0.26 100.0 SNORD72-201 snoRNA lung (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 5485.00 79.21 8.26 100.0 SNORD70B-201 snoRNA lung (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 11482.00 68.89 17.29 98.13 RNY4P18-201 misc RNA lung (Tissue)