ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 1201.00 60.20 1.92 100.0 SNORD14C-201 snoRNA frontal cortex (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 43452.00 53.27 69.34 100.0 SNORD115-44-201 snoRNA frontal cortex (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 19.00 7.51 0.03 100.0 RNA5SP77-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 41118.00 68.15 65.62 99.28 SNORD114-22-201 snoRNA frontal cortex (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 17658.00 29.27 28.18 100.0 SNORD114-22-201 snoRNA frontal cortex (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 13320.00 80.30 21.26 100.0 SNORD6-201 snoRNA frontal cortex (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1475.00 8.89 2.35 100.0 SNORD6-201 snoRNA frontal cortex (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 380.00 1.57 0.61 100.0 RNY3-201 misc RNA frontal cortex (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 6643.00 10.41 10.60 85.34 SNORD82-201 snoRNA frontal cortex (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 10402.37 16.30 16.60 56.27 SNORD82-201 snoRNA frontal cortex (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 8303.06 13.01 13.25 44.92 SNORD82-201 snoRNA frontal cortex (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 560.00 0.88 0.89 100.0 SNORD82-201 snoRNA frontal cortex (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 282.00 0.44 0.45 100.0 SNORD82-201 snoRNA frontal cortex (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 31720.00 49.71 50.62 98.4 SNORD82-201 snoRNA frontal cortex (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 355.00 0.56 0.57 100.0 SNORD82-201 snoRNA frontal cortex (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 9126.00 95.73 14.56 97.16 MIR146B-201 miRNA frontal cortex (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 43.00 25.29 0.07 100.0 SNHG20-201 lncRNA frontal cortex (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 121.00 12.30 0.19 100.0 ATP5MK-205 protein coding frontal cortex (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 162.00 16.46 0.26 100.0 ATP5MK-205 protein coding frontal cortex (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 14.00 16.47 0.02 100.0 LINC01556-201 lncRNA frontal cortex (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 5.00 12.50 0.01 100.0 ATAD3A-202 protein coding frontal cortex (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 4773.00 58.07 7.62 72.9 TMC5-202 protein coding frontal cortex (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 12.00 9.68 0.02 100.0 ZMYM2-203 protein coding frontal cortex (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 668.00 6.07 1.07 100.0 RNVU1-7-201 snRNA frontal cortex (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 1969.00 40.73 3.14 100.0 SNORD24-201 snoRNA frontal cortex (Tissue)