ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 230.00 10.24 0.37 37.77 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 619.00 15.22 0.99 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 47904.00 52.95 76.45 89.75 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 6370.00 7.04 10.17 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 61.00 11.55 0.10 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 18.00 1.27 0.03 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 20.00 0.07 0.03 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 77.00 0.93 0.12 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 85.00 1.02 0.14 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 190.00 2.29 0.30 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 305.00 3.68 0.49 97.76 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 216.00 2.60 0.34 71.52 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 186.00 2.24 0.30 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 1436.00 20.32 2.29 41.17 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 177.00 2.50 0.28 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 107.00 1.49 0.17 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 23.00 0.15 0.04 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 5.00 0.03 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 143.00 0.92 0.23 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 8627.00 55.50 13.77 79.76 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 215.00 1.38 0.34 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 80.00 1.35 0.13 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 558.00 8.18 0.89 31.74 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 18.00 0.33 0.03 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 570.00 13.15 0.91 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA frontal cortex (Tissue)