ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 350.00 0.06 0.56 100.0 MIR17HG-214 lncRNA frontal cortex (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 5193.00 0.94 8.29 100.0 MIR17HG-214 lncRNA frontal cortex (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 2674.00 0.48 4.27 100.0 MIR17HG-214 lncRNA frontal cortex (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 1745.00 0.28 2.78 100.0 SNHG32-223 lncRNA frontal cortex (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 1027.00 0.17 1.64 100.0 SNHG32-223 lncRNA frontal cortex (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 1000.00 0.16 1.60 100.0 SNHG32-223 lncRNA frontal cortex (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 5131.00 0.84 8.19 60.56 SNHG32-223 lncRNA frontal cortex (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 595640.00 97.05 950.55 100.0 SNHG32-223 lncRNA frontal cortex (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 41212.00 84.69 65.77 95.22 SNHG32-227 lncRNA frontal cortex (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 581.00 1.19 0.93 100.0 SNHG32-227 lncRNA frontal cortex (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 568.00 1.17 0.91 100.0 SNHG32-227 lncRNA frontal cortex (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 883.00 1.81 1.41 100.0 SNHG32-227 lncRNA frontal cortex (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 94.00 71.21 0.15 100.0 B4GALT1-203 nonsense mediated decay frontal cortex (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 1030.00 12.24 1.64 100.0 ENST00000722183 lncRNA frontal cortex (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 3216.00 38.22 5.13 86.08 ENST00000722183 lncRNA frontal cortex (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 1152.00 13.69 1.84 100.0 ENST00000722183 lncRNA frontal cortex (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 76.00 70.37 0.12 100.0 MIR34BHG-202 lncRNA frontal cortex (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 34062.00 80.57 54.36 84.35 THBS3-AS1-228 lncRNA frontal cortex (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 6.00 40.00 0.01 100.0 MIR200CHG-202 lncRNA frontal cortex (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 1098.00 10.62 1.75 100.0 SNHG16-266 lncRNA frontal cortex (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 2193.00 21.21 3.50 100.0 SNHG16-266 lncRNA frontal cortex (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 1522.00 14.72 2.43 100.0 SNHG16-266 lncRNA frontal cortex (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 375.00 3.63 0.60 100.0 SNHG16-266 lncRNA frontal cortex (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 365.00 49.66 0.58 100.0 MEG8-261 lncRNA frontal cortex (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 2130.00 71.43 3.40 100.0 NR2F2-AS1-327 lncRNA frontal cortex (Tissue)