ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 230.00 0.01 0.37 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 2277.00 0.13 3.63 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 380.00 0.02 0.61 71.7 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 7150.00 0.41 11.41 96.1 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 27.00 0.00 0.04 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 366.00 0.02 0.58 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 1847.00 0.10 2.95 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 1365883.00 77.41 2179.73 99.82 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 2217.00 0.13 3.54 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 1773.00 0.10 2.83 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 2434.00 0.14 3.88 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 2517.00 0.14 4.02 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 1853.00 0.11 2.96 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 363.00 0.02 0.58 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 204.00 0.01 0.33 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 655.00 0.04 1.05 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 9626.00 0.55 15.36 78.06 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 7403.00 0.42 11.81 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 32861.00 1.86 52.44 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 44310.00 2.51 70.71 94.74 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 219511.00 12.44 350.31 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 369.00 0.02 0.59 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 2983.00 0.17 4.76 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 22382.00 1.27 35.72 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_1641_1722_+ 1641–1722 1.00 0.00 0.00 100.0 GAS5-230 retained intron frontal cortex (Tissue)