ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 640.00 10.09 1.02 100.0 RPS11-206 retained intron frontal cortex (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 5090.00 80.23 8.12 100.0 RPS11-206 retained intron frontal cortex (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 12197.00 68.50 19.46 70.58 CARMN-209 lncRNA frontal cortex (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 2161.00 34.97 3.45 100.0 ENST00000602478 lncRNA frontal cortex (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 3.00 6.82 0.00 100.0 PPFIA1P1-201 processed pseudogene frontal cortex (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 1221.00 41.38 1.95 100.0 SNORD114-21-201 snoRNA frontal cortex (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 1029.00 34.87 1.64 100.0 SNORD114-21-201 snoRNA frontal cortex (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 36894.00 40.50 58.88 100.0 SNORD115-40-201 snoRNA frontal cortex (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 21135.00 98.18 33.73 100.0 MIR98-201 miRNA frontal cortex (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 20489.00 97.47 32.70 100.0 SNORD113-5-201 snoRNA frontal cortex (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 5471.00 92.93 8.73 100.0 MIR15A-201 miRNA frontal cortex (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 201.00 79.13 0.32 100.0 MIR376C-201 miRNA frontal cortex (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 614.00 57.33 0.98 100.0 SNHG21-206 retained intron frontal cortex (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 112.00 17.53 0.18 100.0 SNORD11B-201 snoRNA frontal cortex (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 1998.00 67.02 3.19 100.0 SNORD91B-201 snoRNA frontal cortex (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 63.00 62.38 0.10 100.0 MIR219A2HG-201 lncRNA frontal cortex (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 13485.00 55.44 21.52 65.79 SNORD91A-201 snoRNA frontal cortex (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 8038.00 46.30 12.83 96.62 MIR486-1-201 miRNA frontal cortex (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 16756.00 17.32 26.74 73.87 NOP56-219 retained intron frontal cortex (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 1495.00 1.55 2.39 100.0 NOP56-219 retained intron frontal cortex (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 917.00 0.95 1.46 100.0 NOP56-219 retained intron frontal cortex (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 52966.00 54.74 84.53 80.27 NOP56-219 retained intron frontal cortex (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 1180.00 17.95 1.88 47.29 RNA5-8SN2-201 rRNA frontal cortex (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 31.19 0.47 0.05 49.51 RNA5-8SN2-201 rRNA frontal cortex (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 2.00 0.03 0.00 100.0 RNA5-8SN2-201 rRNA frontal cortex (Tissue)