ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 60273.00 96.30 96.19 99.33 SNORD19C-201 snoRNA frontal cortex (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 2671.00 1.13 4.26 100.0 SNORD12B-201 snoRNA frontal cortex (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 334.00 0.14 0.53 100.0 SNORD12B-201 snoRNA frontal cortex (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 226623.00 95.49 361.65 98.98 SNORD12B-201 snoRNA frontal cortex (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 9207.00 35.80 14.69 100.0 Y_RNA.609-201 misc RNA frontal cortex (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 858.00 18.30 1.37 100.0 Y_RNA.612-201 misc RNA frontal cortex (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 262379.00 96.52 418.72 99.32 SNORD71-201 snoRNA frontal cortex (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 3555.00 1.31 5.67 100.0 SNORD71-201 snoRNA frontal cortex (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 1188.00 0.44 1.90 100.0 SNORD71-201 snoRNA frontal cortex (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 6706.00 77.38 10.70 91.72 MIR194-2HG-201 lncRNA frontal cortex (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 1408.00 16.25 2.25 53.88 MIR194-2HG-201 lncRNA frontal cortex (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 24.00 0.67 0.04 100.0 LINC01783-201 lncRNA frontal cortex (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 48.00 87.27 0.08 100.0 RPS7P15-201 processed pseudogene frontal cortex (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 85.00 0.71 0.14 100.0 SNORD62B-201 snoRNA frontal cortex (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 2697.00 22.51 4.30 86.94 SNORD62B-201 snoRNA frontal cortex (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 441.00 3.68 0.70 100.0 SNORD62B-201 snoRNA frontal cortex (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 3295.00 27.50 5.26 100.0 SNORD62B-201 snoRNA frontal cortex (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 1063.00 8.87 1.70 100.0 SNORD62B-201 snoRNA frontal cortex (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 25.00 78.12 0.04 100.0 MRPL32-203 nonsense mediated decay frontal cortex (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 954.00 98.25 1.52 100.0 ENST00000436739 lncRNA frontal cortex (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 581.00 6.00 0.93 100.0 TMEM107-204 protein coding frontal cortex (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 1271.00 13.13 2.03 57.67 TMEM107-204 protein coding frontal cortex (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 960.00 9.92 1.53 100.0 TMEM107-204 protein coding frontal cortex (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 45.00 0.47 0.07 100.0 TMEM107-204 protein coding frontal cortex (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 177.00 1.83 0.28 71.08 TMEM107-204 protein coding frontal cortex (Tissue)