ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 587357.00 94.54 937.33 95.75 MIR100-201 miRNA frontal cortex (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 386.00 84.10 0.62 100.0 MIR301A-201 miRNA frontal cortex (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 4276.00 14.09 6.82 27.28 MIR130A-201 miRNA frontal cortex (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 25750.00 84.87 41.09 95.07 MIR130A-201 miRNA frontal cortex (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 493717.00 98.48 787.89 99.29 MIRLET7F2-201 miRNA frontal cortex (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 309.00 71.69 0.49 100.0 MIR652-201 miRNA frontal cortex (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1740.00 61.51 2.78 100.0 MIR140-201 miRNA frontal cortex (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 601.00 13.05 0.96 100.0 MIR106B-201 miRNA frontal cortex (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 1198.00 26.02 1.91 77.64 MIR106B-201 miRNA frontal cortex (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 30414.00 26.87 48.54 95.57 SNORD83A-201 snoRNA frontal cortex (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 79673.00 70.39 127.15 98.61 SNORD83A-201 snoRNA frontal cortex (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 287.00 65.38 0.46 100.0 SNORD41-201 snoRNA frontal cortex (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 549.00 11.04 0.88 65.59 MT-TF-201 Mt tRNA frontal cortex (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 17.00 0.34 0.03 100.0 MT-TF-201 Mt tRNA frontal cortex (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 64.00 1.29 0.10 68.82 MT-TF-201 Mt tRNA frontal cortex (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 901.00 9.95 1.44 100.0 MT-TV-201 Mt tRNA frontal cortex (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 121.00 0.13 0.19 100.0 MT-RNR2-201 Mt rRNA frontal cortex (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 6754.00 7.10 10.78 95.87 MT-RNR2-201 Mt rRNA frontal cortex (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 1629.00 1.71 2.60 100.0 MT-RNR2-201 Mt rRNA frontal cortex (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 273.00 0.29 0.44 100.0 MT-RNR2-201 Mt rRNA frontal cortex (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 6693.00 7.04 10.68 80.22 MT-RNR2-201 Mt rRNA frontal cortex (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 1050.00 1.10 1.68 100.0 MT-RNR2-201 Mt rRNA frontal cortex (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 10.00 0.01 0.02 100.0 MT-RNR2-201 Mt rRNA frontal cortex (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 604.00 6.95 0.96 85.8 MT-TI-201 Mt tRNA frontal cortex (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 4237.00 48.77 6.76 100.0 MT-TI-201 Mt tRNA frontal cortex (Tissue)