ENCFF001RMO

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 1128.00 12.70 2.18 100.0 DNAJC5-203 nonsense mediated decay cerebellum (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 806.00 13.97 1.56 100.0 ENST00000707189 TEC cerebellum (Tissue)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 213.00 0.05 0.41 100.0 MIR17HG-214 lncRNA cerebellum (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 207454.78 53.29 400.54 58.21 MIR17HG-214 lncRNA cerebellum (Tissue)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 86.00 0.02 0.17 100.0 MIR17HG-214 lncRNA cerebellum (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 1360.00 0.35 2.63 100.0 MIR17HG-214 lncRNA cerebellum (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 167951.53 43.15 324.27 46.69 MIR17HG-214 lncRNA cerebellum (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 8813.00 2.26 17.02 100.0 MIR17HG-214 lncRNA cerebellum (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 58.00 0.01 0.11 100.0 MIR17HG-214 lncRNA cerebellum (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 3955.00 1.02 7.64 100.0 MIR17HG-214 lncRNA cerebellum (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 2843.00 0.73 5.49 100.0 MIR17HG-214 lncRNA cerebellum (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 7936.00 1.43 15.32 100.0 SNHG32-223 lncRNA cerebellum (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 2687.00 0.48 5.19 100.0 SNHG32-223 lncRNA cerebellum (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 721.00 0.13 1.39 100.0 SNHG32-223 lncRNA cerebellum (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 4657.00 0.84 8.99 56.86 SNHG32-223 lncRNA cerebellum (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 528731.00 95.26 1020.83 100.0 SNHG32-223 lncRNA cerebellum (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 44846.00 75.33 86.58 99.11 SNHG32-227 lncRNA cerebellum (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 8306.00 13.95 16.04 100.0 SNHG32-227 lncRNA cerebellum (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 668.00 1.12 1.29 100.0 SNHG32-227 lncRNA cerebellum (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 1059.00 1.78 2.04 100.0 SNHG32-227 lncRNA cerebellum (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 674.00 77.83 1.30 100.0 B4GALT1-203 nonsense mediated decay cerebellum (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 1135.00 7.17 2.19 100.0 ENST00000722183 lncRNA cerebellum (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 6170.00 38.98 11.91 86.35 ENST00000722183 lncRNA cerebellum (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 1163.00 7.35 2.25 100.0 ENST00000722183 lncRNA cerebellum (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 649.00 87.35 1.25 100.0 MIR34BHG-202 lncRNA cerebellum (Tissue)