ENCFF001RMO

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 49.00 0.46 0.09 100.0 LINC02739-203 lncRNA cerebellum (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 181.00 1.71 0.35 55.18 LINC02739-203 lncRNA cerebellum (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 1622.00 15.34 3.13 100.0 LINC02739-203 lncRNA cerebellum (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 2570.00 24.30 4.96 100.0 LINC02739-203 lncRNA cerebellum (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 16.00 0.15 0.03 100.0 LINC02739-203 lncRNA cerebellum (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 147.00 1.39 0.28 44.82 LINC02739-203 lncRNA cerebellum (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 47392.00 91.77 91.50 100.0 MIR124-1HG-216 lncRNA cerebellum (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 334.00 17.16 0.64 100.0 SNHG10-212 lncRNA cerebellum (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 33407.16 35.80 64.50 37.3 SNHG19-202 lncRNA cerebellum (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 55773.20 59.76 107.68 73.4 SNHG19-202 lncRNA cerebellum (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 13.05 0.01 0.03 93.24 SNHG19-202 lncRNA cerebellum (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 1466.00 30.22 2.83 100.0 MIR222HG-206 lncRNA cerebellum (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 2242.00 46.22 4.33 77.87 MIR222HG-206 lncRNA cerebellum (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 54.00 1.11 0.10 100.0 MIR222HG-206 lncRNA cerebellum (Tissue)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 1.00 14.29 0.00 100.0 MIR302CHG-205 lncRNA cerebellum (Tissue)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 3.00 42.86 0.01 100.0 MIR302CHG-205 lncRNA cerebellum (Tissue)
ENST00000688371.3 ENST00000688371.3_458_481_+ 458–481 1.00 14.29 0.00 100.0 MIR302CHG-205 lncRNA cerebellum (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 5.00 3.14 0.01 100.0 RPSA-216 retained intron cerebellum (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 3071.00 2.96 5.93 85.35 MIR99AHG-370 lncRNA cerebellum (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 97450.00 93.88 188.15 98.74 MIR99AHG-370 lncRNA cerebellum (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 688.00 93.61 1.33 100.0 HPS4-237 retained intron cerebellum (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 1100.00 88.92 2.12 100.0 MEG8-253 lncRNA cerebellum (Tissue)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 149.00 13.89 0.29 100.0 MEG9-206 lncRNA cerebellum (Tissue)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 125.00 11.65 0.24 100.0 MEG9-206 lncRNA cerebellum (Tissue)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 311.00 28.98 0.60 100.0 MEG9-206 lncRNA cerebellum (Tissue)