ENCFF001RMO

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 268031.00 33.51 517.49 100.0 SNHG14-315 lncRNA cerebellum (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 227244.00 28.41 438.74 97.05 SNHG14-315 lncRNA cerebellum (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 250601.00 31.33 483.84 93.81 SNHG14-315 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 1932.00 0.71 3.73 99.08 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 2160.00 0.79 4.17 100.0 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 98571.62 35.99 190.31 44.22 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 533.00 0.19 1.03 100.0 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 675.00 0.25 1.30 100.0 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 145058.73 52.96 280.07 59.44 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 7515.00 2.74 14.51 87.96 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 195.00 0.07 0.38 100.0 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 2033.00 0.74 3.93 100.0 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 58.00 0.02 0.11 100.0 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 1.00 0.00 0.00 100.0 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 2718.00 4.42 5.25 79.99 SNHG14-323 lncRNA cerebellum (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 668.00 0.24 1.29 61.97 MEG8-251 lncRNA cerebellum (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 252406.00 91.24 487.32 97.58 MEG8-251 lncRNA cerebellum (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 561.00 0.20 1.08 51.71 MEG8-251 lncRNA cerebellum (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 9044.00 3.27 17.46 88.05 MEG8-251 lncRNA cerebellum (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 448.00 0.16 0.86 100.0 MEG8-251 lncRNA cerebellum (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 59791.00 65.59 115.44 89.64 SNHG14-336 lncRNA cerebellum (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 27536.00 30.20 53.16 50.12 SNHG14-336 lncRNA cerebellum (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 45190.00 83.19 87.25 97.74 SNHG14-341 lncRNA cerebellum (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 21.00 0.67 0.04 100.0 NCL-211 retained intron cerebellum (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 1410.00 21.47 2.72 100.0 FMN2-209 protein coding CDS not defined cerebellum (Tissue)