ENCFF001RMO

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 20151.00 56.41 38.91 61.3 VMP1-217 retained intron cerebellum (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 838.00 0.07 1.62 100.0 C19orf48P-203 retained intron cerebellum (Tissue)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 855161.89 75.44 1651.08 80.7 C19orf48P-203 retained intron cerebellum (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 252978.44 22.32 488.43 22.76 C19orf48P-203 retained intron cerebellum (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 7883.00 0.70 15.22 88.55 C19orf48P-203 retained intron cerebellum (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 188.00 0.02 0.36 100.0 C19orf48P-203 retained intron cerebellum (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 28.00 0.00 0.05 100.0 C19orf48P-203 retained intron cerebellum (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 47.00 82.46 0.09 100.0 ENST00000597420 lncRNA cerebellum (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 1297.00 16.65 2.50 100.0 RPS11-206 retained intron cerebellum (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 4300.00 55.21 8.30 100.0 RPS11-206 retained intron cerebellum (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 64645.00 53.79 124.81 56.27 CARMN-209 lncRNA cerebellum (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 921.00 25.18 1.78 100.0 ENST00000602478 lncRNA cerebellum (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 17.00 11.26 0.03 100.0 PPFIA1P1-201 processed pseudogene cerebellum (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 2359.00 50.90 4.55 100.0 SNORD114-21-201 snoRNA cerebellum (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 577.00 12.45 1.11 100.0 SNORD114-21-201 snoRNA cerebellum (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 12546.00 35.83 24.22 100.0 SNORD115-40-201 snoRNA cerebellum (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 12913.00 98.12 24.93 100.0 MIR98-201 miRNA cerebellum (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 19273.00 93.85 37.21 100.0 SNORD113-5-201 snoRNA cerebellum (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 9165.00 93.83 17.70 100.0 MIR15A-201 miRNA cerebellum (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 353.00 87.59 0.68 100.0 MIR376C-201 miRNA cerebellum (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 971.00 51.68 1.87 100.0 SNHG21-206 retained intron cerebellum (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 324.00 33.71 0.63 100.0 SNORD11B-201 snoRNA cerebellum (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 8426.00 73.42 16.27 100.0 SNORD91B-201 snoRNA cerebellum (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 695.00 57.06 1.34 100.0 MIR219A2HG-201 lncRNA cerebellum (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 26026.00 61.06 50.25 79.02 SNORD91A-201 snoRNA cerebellum (Tissue)