ENCFF001RMO

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 189400.00 48.41 365.68 92.34 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 46592.00 11.91 89.96 98.09 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 120.00 0.03 0.23 100.0 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 4844.00 1.24 9.35 56.17 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 17002.00 4.35 32.83 100.0 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 1584.00 74.05 3.06 88.74 MIR3142HG-201 lncRNA cerebellum (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 20967.00 89.06 40.48 100.0 SNHG6-204 retained intron cerebellum (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 66292.00 42.31 127.99 100.0 MIR151A-201 miRNA cerebellum (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 73108.00 46.66 141.15 85.11 MIR151A-201 miRNA cerebellum (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 8670.00 96.41 16.74 100.0 DENND3-221 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 933.00 0.32 1.80 68.1 WDR74-204 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 11.00 0.00 0.02 18.64 WDR74-204 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 191.00 0.07 0.37 79.92 WDR74-204 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 11.00 0.00 0.02 100.0 WDR74-204 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 48.00 0.02 0.09 81.36 WDR74-204 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 309.00 0.11 0.60 100.0 WDR74-204 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 649.00 0.22 1.25 100.0 WDR74-204 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 139.00 0.05 0.27 100.0 WDR74-204 protein coding cerebellum (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 30938.00 88.10 59.73 100.0 HSPA8-211 retained intron cerebellum (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 2073.00 22.19 4.00 100.0 SCARNA9-201 lncRNA cerebellum (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 101728.00 96.21 196.41 100.0 TAF1D-215 retained intron cerebellum (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 339.00 0.32 0.65 100.0 TAF1D-215 retained intron cerebellum (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 539.00 7.32 1.04 100.0 HSPA8-215 retained intron cerebellum (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 5031.00 68.29 9.71 100.0 HSPA8-215 retained intron cerebellum (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 49.00 0.67 0.09 100.0 HSPA8-215 retained intron cerebellum (Tissue)