ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 2606.00 4.12 4.98 100.0 7SK.1-201 misc RNA uterus (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 2406.00 51.13 4.59 100.0 SNORD14C-201 snoRNA uterus (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 540.00 53.78 1.03 100.0 SNORD115-44-201 snoRNA uterus (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 287.00 10.66 0.55 100.0 RNA5SP77-201 rRNA pseudogene uterus (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 64219.00 46.68 122.63 100.0 SNORD114-22-201 snoRNA uterus (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 69028.00 50.17 131.81 99.63 SNORD114-22-201 snoRNA uterus (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1204.00 3.96 2.30 100.0 SNORD6-201 snoRNA uterus (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 26450.00 86.93 50.51 100.0 SNORD6-201 snoRNA uterus (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 2251.00 10.55 4.30 100.0 RNY3-201 misc RNA uterus (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 71181.00 54.77 135.92 97.93 SNORD82-201 snoRNA uterus (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 642.00 0.49 1.23 100.0 SNORD82-201 snoRNA uterus (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 10252.00 7.89 19.58 89.47 SNORD82-201 snoRNA uterus (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 13656.70 10.51 26.08 42.91 SNORD82-201 snoRNA uterus (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 17787.14 13.69 33.96 55.89 SNORD82-201 snoRNA uterus (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 722.00 0.56 1.38 100.0 SNORD82-201 snoRNA uterus (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 748.00 0.58 1.43 100.0 SNORD82-201 snoRNA uterus (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 101658.00 91.64 194.12 93.64 MIR146B-201 miRNA uterus (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 413.00 54.34 0.79 100.0 SNHG20-201 lncRNA uterus (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 96.00 9.03 0.18 100.0 ATP5MK-205 protein coding uterus (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 321.00 30.20 0.61 100.0 ATP5MK-205 protein coding uterus (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 13.00 12.50 0.02 100.0 LINC01556-201 lncRNA uterus (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 48.00 69.57 0.09 100.0 ATAD3A-202 protein coding uterus (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 9757.00 51.72 18.63 74.01 TMC5-202 protein coding uterus (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 52.00 80.00 0.10 100.0 ZMYM2-203 protein coding uterus (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 3226.00 16.48 6.16 100.0 RNVU1-7-201 snRNA uterus (Tissue)