ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 45552.00 27.59 86.98 97.38 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 35957.00 21.78 68.66 98.79 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 54.00 0.03 0.10 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1623.00 0.98 3.10 57.55 RNY4-201 misc RNA uterus (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 1383.00 79.26 2.64 85.85 MIR3142HG-201 lncRNA uterus (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 7473.00 78.06 14.27 100.0 SNHG6-204 retained intron uterus (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 40755.00 37.45 77.82 100.0 MIR151A-201 miRNA uterus (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 57852.00 53.16 110.47 89.04 MIR151A-201 miRNA uterus (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 2230.00 97.76 4.26 100.0 DENND3-221 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 3020.00 1.11 5.77 67.43 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 70.00 0.03 0.13 29.91 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 561.00 0.21 1.07 69.43 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 75.00 0.03 0.14 100.0 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 164.00 0.06 0.31 70.09 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 1473.00 0.54 2.81 100.0 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 2507.00 0.92 4.79 100.0 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 640.00 0.23 1.22 100.0 WDR74-204 protein coding uterus (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 28921.00 85.43 55.22 100.0 HSPA8-211 retained intron uterus (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 774.00 15.09 1.48 100.0 SCARNA9-201 lncRNA uterus (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 55666.00 85.60 106.29 100.0 TAF1D-215 retained intron uterus (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 848.00 1.30 1.62 100.0 TAF1D-215 retained intron uterus (Tissue)
ENST00000531908.5 ENST00000531908.5_147_241_+ 147–241 1.00 0.09 0.00 100.0 RPS13-208 retained intron uterus (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 29.00 12.18 0.06 100.0 HSPA8-215 retained intron uterus (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 101.00 42.44 0.19 100.0 HSPA8-215 retained intron uterus (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 926.00 18.68 1.77 100.0 RPS2-215 retained intron uterus (Tissue)