ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 262466.00 82.31 501.18 90.36 MT-TE-201 Mt tRNA uterus (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 1602.00 0.50 3.06 81.99 MT-TE-201 Mt tRNA uterus (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 2749.00 0.86 5.25 100.0 MT-TE-201 Mt tRNA uterus (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 151.00 0.05 0.29 8.13 MT-TE-201 Mt tRNA uterus (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 1707.00 0.54 3.26 93.48 MT-TE-201 Mt tRNA uterus (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 688.00 0.22 1.31 100.0 MT-TE-201 Mt tRNA uterus (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 3427.00 56.30 6.54 100.0 MIR196A1-201 miRNA uterus (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 1303.00 15.12 2.49 100.0 MT-RNR1-201 Mt rRNA uterus (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 1239.00 14.38 2.37 100.0 MT-RNR1-201 Mt rRNA uterus (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 4143.00 82.27 7.91 100.0 MIR454-201 miRNA uterus (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 115.00 19.90 0.22 100.0 MIR501-201 miRNA uterus (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 5386.00 93.56 10.28 100.0 MIR769-201 miRNA uterus (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 48.00 60.00 0.09 100.0 KRTAP19-1-201 protein coding uterus (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 816.00 41.05 1.56 100.0 MIR708-201 miRNA uterus (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 342.00 90.00 0.65 100.0 MIR509-3-201 miRNA uterus (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 128.00 50.59 0.24 100.0 MIR543-201 miRNA uterus (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 144.00 94.74 0.27 100.0 MIR301B-201 miRNA uterus (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 8698.00 60.65 16.61 72.95 RNU1-82P-201 snRNA uterus (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 791.00 3.96 1.51 100.0 SNORD66-201 snoRNA uterus (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 7039.00 35.28 13.44 100.0 SNORD66-201 snoRNA uterus (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 78.00 0.39 0.15 100.0 SNORD66-201 snoRNA uterus (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 3714.00 18.62 7.09 78.5 SNORD66-201 snoRNA uterus (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 174.00 62.37 0.33 100.0 U3.17-201 snoRNA uterus (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 5637.00 42.68 10.76 100.0 SNORD17-201 snoRNA uterus (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 82.00 58.99 0.16 100.0 SNORD72-201 snoRNA uterus (Tissue)