ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 6.00 7.41 0.01 100.0 HCN2-201 protein coding frontal cortex (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 68933.00 97.44 113.60 100.0 SLC49A4-201 protein coding frontal cortex (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 2106.00 20.21 3.47 100.0 ATP5MC3-201 protein coding frontal cortex (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 62.00 74.70 0.10 100.0 CDC25A-201 protein coding frontal cortex (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 180.00 87.38 0.30 100.0 BLOC1S4-201 protein coding frontal cortex (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 334.00 12.35 0.55 100.0 ATAD5-201 protein coding frontal cortex (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 326.00 26.42 0.54 100.0 SLITRK5-201 protein coding frontal cortex (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 20.00 37.04 0.03 100.0 HASPIN-201 protein coding frontal cortex (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 770.00 77.78 1.27 100.0 PRR14L-201 protein coding frontal cortex (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 2921.00 96.34 4.81 100.0 ATG101-201 protein coding frontal cortex (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 299.00 66.74 0.49 100.0 PRICKLE1-201 protein coding frontal cortex (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 876.00 97.01 1.44 99.32 MIR133A2-201 miRNA frontal cortex (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 7.00 25.93 0.01 100.0 PBLD-204 protein coding frontal cortex (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 492819.00 91.73 812.16 99.22 MIRLET7BHG-201 lncRNA frontal cortex (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 23489.00 4.37 38.71 88.56 MIRLET7BHG-201 lncRNA frontal cortex (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 114.00 100.00 0.19 100.0 MIR375-201 miRNA frontal cortex (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 8105.00 68.26 13.36 100.0 MIR30E-201 miRNA frontal cortex (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 2676.00 22.54 4.41 100.0 MIR30E-201 miRNA frontal cortex (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 563.00 42.46 0.93 100.0 MIR29A-201 miRNA frontal cortex (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 2478.00 89.23 4.08 100.0 MIR345-201 miRNA frontal cortex (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 152094.00 99.19 250.65 100.0 MIR16-2-201 miRNA frontal cortex (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 54792.00 90.18 90.30 100.0 MIR340-201 miRNA frontal cortex (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 2796.00 4.60 4.61 100.0 MIR340-201 miRNA frontal cortex (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 12916.00 85.55 21.29 100.0 MIR107-201 miRNA frontal cortex (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 2587.00 90.33 4.26 93.12 MIR381-201 miRNA frontal cortex (Tissue)