ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 2737.00 68.99 4.51 100.0 SNORD14C-201 snoRNA frontal cortex (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 40830.00 51.90 67.29 100.0 SNORD115-44-201 snoRNA frontal cortex (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 13.00 3.92 0.02 100.0 RNA5SP77-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 41294.00 73.56 68.05 97.49 SNORD114-22-201 snoRNA frontal cortex (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 12174.00 21.69 20.06 100.0 SNORD114-22-201 snoRNA frontal cortex (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 49034.00 91.35 80.81 100.0 SNORD6-201 snoRNA frontal cortex (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1727.00 3.22 2.85 100.0 SNORD6-201 snoRNA frontal cortex (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 210.00 1.26 0.35 100.0 RNY3-201 misc RNA frontal cortex (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 5909.00 10.09 9.74 85.34 SNORD82-201 snoRNA frontal cortex (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 9332.38 15.93 15.38 59.4 SNORD82-201 snoRNA frontal cortex (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 6496.48 11.09 10.71 41.35 SNORD82-201 snoRNA frontal cortex (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 419.00 0.72 0.69 100.0 SNORD82-201 snoRNA frontal cortex (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 308.00 0.53 0.51 100.0 SNORD82-201 snoRNA frontal cortex (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 29873.00 50.99 49.23 98.85 SNORD82-201 snoRNA frontal cortex (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 476.00 0.81 0.78 100.0 SNORD82-201 snoRNA frontal cortex (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 8856.00 95.58 14.59 97.06 MIR146B-201 miRNA frontal cortex (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 19.00 20.00 0.03 100.0 SNHG20-201 lncRNA frontal cortex (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 264.00 15.00 0.44 100.0 ATP5MK-205 protein coding frontal cortex (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 332.00 18.86 0.55 100.0 ATP5MK-205 protein coding frontal cortex (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 19.00 11.11 0.03 100.0 LINC01556-201 lncRNA frontal cortex (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 29.00 26.36 0.05 100.0 ATAD3A-202 protein coding frontal cortex (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 3865.00 60.74 6.37 74.93 TMC5-202 protein coding frontal cortex (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 12.00 50.00 0.02 100.0 ZMYM2-203 protein coding frontal cortex (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 529.00 5.84 0.87 100.0 RNVU1-7-201 snRNA frontal cortex (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 5931.00 68.02 9.77 100.0 SNORD24-201 snoRNA frontal cortex (Tissue)