ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 312.00 21.71 0.51 100.0 SNORD113-3-201 snoRNA frontal cortex (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 19895.00 75.76 32.79 100.0 SNORD52-201 snoRNA frontal cortex (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 6084.00 40.54 10.03 61.85 SNORD117-201 snoRNA frontal cortex (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 3752.00 25.00 6.18 49.66 SNORD117-201 snoRNA frontal cortex (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 1113.00 3.57 1.83 100.0 SNORD114-3-201 snoRNA frontal cortex (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 691.00 2.22 1.14 100.0 SNORD114-3-201 snoRNA frontal cortex (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 26641.00 85.46 43.90 93.73 SNORD114-3-201 snoRNA frontal cortex (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 22.00 1.47 0.04 100.0 RNA5SP298-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 39024.00 49.25 64.31 100.0 SNORD115-38-201 snoRNA frontal cortex (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 72566.00 56.91 119.59 100.0 SNORD115-10-201 snoRNA frontal cortex (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 10413.00 83.71 17.16 100.0 SNORD113-9-201 snoRNA frontal cortex (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 8265.00 59.51 13.62 100.0 SNORD115-20-201 snoRNA frontal cortex (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 18820.00 89.49 31.02 100.0 SNORD38A-201 snoRNA frontal cortex (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 274.00 1.30 0.45 100.0 SNORD38A-201 snoRNA frontal cortex (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 848.00 4.03 1.40 100.0 SNORD38A-201 snoRNA frontal cortex (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 28272.00 85.17 46.59 93.67 SNORD114-20-201 snoRNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 2032.00 11.39 3.35 100.0 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 1372.00 7.69 2.26 66.41 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 342.00 1.92 0.56 100.0 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 409.00 2.29 0.67 100.0 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 693.00 3.88 1.14 100.0 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 170.00 0.95 0.28 64.39 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 55.00 0.31 0.09 100.0 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 3571.00 20.02 5.88 79.69 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 2385.00 13.37 3.93 77.46 7SK.1-201 misc RNA frontal cortex (Tissue)