ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 28651.00 35.71 47.22 100.0 SNORD115-34-201 snoRNA frontal cortex (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 326.00 17.42 0.54 100.0 RNU5E-1-201 snRNA frontal cortex (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 1.00 0.02 0.00 4.55 RNA5SP370-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 3.00 3.45 0.00 100.0 SNORA31-201 snoRNA frontal cortex (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 2.00 0.04 0.00 100.0 RNA5SP389-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 19.00 0.38 0.03 90.48 RNA5SP389-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 7.00 0.14 0.01 70.0 RNA5SP389-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 1.00 0.02 0.00 100.0 RNA5SP389-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 323.00 1.45 0.53 100.0 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 2315.00 10.39 3.82 74.29 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 3031.30 13.60 5.00 41.5 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 655.00 2.94 1.08 79.68 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 570.00 2.56 0.94 58.95 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 46.00 0.21 0.08 100.0 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 149.00 0.67 0.25 36.61 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 1127.00 5.06 1.86 43.02 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 217.41 0.98 0.36 48.97 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 431.00 1.93 0.71 51.87 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 963.00 4.32 1.59 75.89 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 681.00 3.06 1.12 100.0 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 4715.94 21.16 7.77 67.57 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 218.20 0.98 0.36 37.69 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 369.00 1.66 0.61 87.65 RNU5A-1-201 snRNA frontal cortex (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 7909.00 89.13 13.03 100.0 SNORD114-14-201 snoRNA frontal cortex (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 465.00 6.64 0.77 100.0 SNORD104-201 snoRNA frontal cortex (Tissue)