ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 199569.88 40.83 328.89 45.33 MIR17HG-214 lncRNA frontal cortex (Tissue)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 70.00 0.01 0.12 100.0 MIR17HG-214 lncRNA frontal cortex (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 935.00 0.19 1.54 100.0 MIR17HG-214 lncRNA frontal cortex (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 260342.88 53.26 429.04 56.5 MIR17HG-214 lncRNA frontal cortex (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 7756.00 1.59 12.78 100.0 MIR17HG-214 lncRNA frontal cortex (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 319.00 0.07 0.53 100.0 MIR17HG-214 lncRNA frontal cortex (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 4620.00 0.95 7.61 100.0 MIR17HG-214 lncRNA frontal cortex (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 2585.00 0.53 4.26 100.0 MIR17HG-214 lncRNA frontal cortex (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 2488.00 0.44 4.10 100.0 SNHG32-223 lncRNA frontal cortex (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 1220.00 0.21 2.01 100.0 SNHG32-223 lncRNA frontal cortex (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 719.00 0.13 1.18 100.0 SNHG32-223 lncRNA frontal cortex (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 4035.00 0.71 6.65 53.28 SNHG32-223 lncRNA frontal cortex (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 552060.00 96.90 909.79 100.0 SNHG32-223 lncRNA frontal cortex (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 65043.00 88.26 107.19 97.4 SNHG32-227 lncRNA frontal cortex (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 1080.00 1.47 1.78 100.0 SNHG32-227 lncRNA frontal cortex (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 795.00 1.08 1.31 100.0 SNHG32-227 lncRNA frontal cortex (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 1027.00 1.39 1.69 100.0 SNHG32-227 lncRNA frontal cortex (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 293.00 77.51 0.48 100.0 B4GALT1-203 nonsense mediated decay frontal cortex (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 1274.00 14.32 2.10 100.0 ENST00000722183 lncRNA frontal cortex (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 3246.00 36.48 5.35 83.36 ENST00000722183 lncRNA frontal cortex (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 873.00 9.81 1.44 100.0 ENST00000722183 lncRNA frontal cortex (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 74.00 77.89 0.12 100.0 MIR34BHG-202 lncRNA frontal cortex (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 31454.00 80.34 51.84 84.69 THBS3-AS1-228 lncRNA frontal cortex (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 7.00 50.00 0.01 100.0 MIR200CHG-202 lncRNA frontal cortex (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 1172.00 14.55 1.93 100.0 SNHG16-266 lncRNA frontal cortex (Tissue)