ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 303.00 3.62 0.50 100.0 LINC02739-203 lncRNA frontal cortex (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 515.00 6.15 0.85 100.0 LINC02739-203 lncRNA frontal cortex (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 264.00 3.15 0.44 32.43 LINC02739-203 lncRNA frontal cortex (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 68903.00 86.53 113.55 100.0 MIR124-1HG-216 lncRNA frontal cortex (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 289.00 20.73 0.48 100.0 SNHG10-212 lncRNA frontal cortex (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 19558.38 27.44 32.23 28.38 SNHG19-202 lncRNA frontal cortex (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 48988.68 68.72 80.73 79.64 SNHG19-202 lncRNA frontal cortex (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 9.32 0.01 0.02 84.76 SNHG19-202 lncRNA frontal cortex (Tissue)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 0.72 0.00 0.00 72.05 SNHG19-202 lncRNA frontal cortex (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 8267.00 30.78 13.62 100.0 MIR222HG-206 lncRNA frontal cortex (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 11514.00 42.87 18.98 80.3 MIR222HG-206 lncRNA frontal cortex (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 662.00 2.46 1.09 100.0 MIR222HG-206 lncRNA frontal cortex (Tissue)
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 2.28 25.33 0.00 76.0 MIR302CHG-205 lncRNA frontal cortex (Tissue)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 1.00 11.11 0.00 100.0 MIR302CHG-205 lncRNA frontal cortex (Tissue)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 2.00 22.22 0.00 100.0 MIR302CHG-205 lncRNA frontal cortex (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 1887.00 1.40 3.11 68.22 MIR99AHG-370 lncRNA frontal cortex (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 128772.00 95.56 212.22 98.45 MIR99AHG-370 lncRNA frontal cortex (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 307.00 90.29 0.51 100.0 HPS4-237 retained intron frontal cortex (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 2436.00 91.30 4.01 100.0 MEG8-253 lncRNA frontal cortex (Tissue)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 196.00 23.00 0.32 100.0 MEG9-206 lncRNA frontal cortex (Tissue)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 139.00 16.31 0.23 100.0 MEG9-206 lncRNA frontal cortex (Tissue)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 146.00 17.14 0.24 100.0 MEG9-206 lncRNA frontal cortex (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 1168.00 13.27 1.92 100.0 DNAJC5-203 nonsense mediated decay frontal cortex (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 456.00 13.98 0.75 100.0 ENST00000707189 TEC frontal cortex (Tissue)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 943.00 0.19 1.55 100.0 MIR17HG-214 lncRNA frontal cortex (Tissue)