ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 3581.00 1.66 5.90 100.0 RPL13-207 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 1804.00 0.15 2.97 53.33 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 17844.00 1.49 29.41 84.44 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 3543.00 0.30 5.84 46.11 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 3691.00 0.31 6.08 64.08 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 23.00 0.00 0.04 100.0 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 4062.00 0.34 6.69 93.34 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 246.00 0.02 0.41 53.36 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 3250.00 0.27 5.36 83.72 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 187377.00 15.64 308.80 77.72 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 777.00 0.06 1.28 100.0 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 941817.00 78.62 1552.11 98.64 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 2788.00 0.23 4.59 100.0 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 1502.00 0.13 2.48 48.37 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 120.00 0.01 0.20 100.0 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 726.00 0.06 1.20 100.0 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 32161.00 96.69 53.00 100.0 RPS8-207 protein coding CDS not defined frontal cortex (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 226.00 6.12 0.37 100.0 RPL7A-206 protein coding CDS not defined frontal cortex (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 1035.00 28.03 1.71 100.0 RPL7A-206 protein coding CDS not defined frontal cortex (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 1094.00 29.62 1.80 100.0 RPL7A-206 protein coding CDS not defined frontal cortex (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 1733539.00 89.96 2856.87 99.32 RPL21-209 retained intron frontal cortex (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 2949.00 0.15 4.86 100.0 RPL21-209 retained intron frontal cortex (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 5344.00 0.28 8.81 100.0 RPL21-209 retained intron frontal cortex (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 1844.00 0.10 3.04 100.0 RPL21-209 retained intron frontal cortex (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 173669.00 9.01 286.21 98.89 RPL21-209 retained intron frontal cortex (Tissue)