ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 2402.00 53.64 3.96 100.0 RNU2-36P-201 snRNA frontal cortex (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 470.00 0.82 0.77 100.0 SNORD19C-201 snoRNA frontal cortex (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 54871.00 95.34 90.43 98.63 SNORD19C-201 snoRNA frontal cortex (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 3069.00 1.61 5.06 100.0 SNORD12B-201 snoRNA frontal cortex (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 271.00 0.14 0.45 100.0 SNORD12B-201 snoRNA frontal cortex (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 181921.00 95.16 299.81 98.99 SNORD12B-201 snoRNA frontal cortex (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 6156.00 40.07 10.15 100.0 Y_RNA.609-201 misc RNA frontal cortex (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 669.00 23.05 1.10 100.0 Y_RNA.612-201 misc RNA frontal cortex (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 4289.00 1.89 7.07 100.0 SNORD71-201 snoRNA frontal cortex (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 973.00 0.43 1.60 100.0 SNORD71-201 snoRNA frontal cortex (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 217145.00 95.71 357.85 99.03 SNORD71-201 snoRNA frontal cortex (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 1814.00 15.05 2.99 55.15 MIR194-2HG-201 lncRNA frontal cortex (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 9549.00 79.20 15.74 92.59 MIR194-2HG-201 lncRNA frontal cortex (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 50.00 2.07 0.08 100.0 LINC01783-201 lncRNA frontal cortex (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 14.00 93.33 0.02 100.0 RPS7P15-201 processed pseudogene frontal cortex (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 4655.00 36.23 7.67 92.49 SNORD62B-201 snoRNA frontal cortex (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 1022.00 7.95 1.68 100.0 SNORD62B-201 snoRNA frontal cortex (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 73.00 0.57 0.12 100.0 SNORD62B-201 snoRNA frontal cortex (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 454.00 3.53 0.75 100.0 SNORD62B-201 snoRNA frontal cortex (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 2289.00 17.82 3.77 100.0 SNORD62B-201 snoRNA frontal cortex (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 51.00 79.69 0.08 100.0 MRPL32-203 nonsense mediated decay frontal cortex (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 1480.00 96.80 2.44 100.0 ENST00000436739 lncRNA frontal cortex (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 674.00 7.73 1.11 100.0 TMEM107-204 protein coding frontal cortex (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 44.00 0.50 0.07 100.0 TMEM107-204 protein coding frontal cortex (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 58.00 0.66 0.10 53.7 TMEM107-204 protein coding frontal cortex (Tissue)