ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 726232.00 95.11 1196.83 96.21 MIR100-201 miRNA frontal cortex (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 1339.00 87.69 2.21 100.0 MIR301A-201 miRNA frontal cortex (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 5312.00 19.92 8.75 35.76 MIR130A-201 miRNA frontal cortex (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 21086.00 79.05 34.75 93.97 MIR130A-201 miRNA frontal cortex (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 290602.00 98.32 478.91 99.22 MIRLET7F2-201 miRNA frontal cortex (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 277.00 66.75 0.46 100.0 MIR652-201 miRNA frontal cortex (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 7.00 63.64 0.01 100.0 MIR653-201 miRNA frontal cortex (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1539.00 54.96 2.54 100.0 MIR140-201 miRNA frontal cortex (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 956.00 22.49 1.58 77.66 MIR106B-201 miRNA frontal cortex (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 698.00 16.42 1.15 100.0 MIR106B-201 miRNA frontal cortex (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 26105.00 26.74 43.02 96.03 SNORD83A-201 snoRNA frontal cortex (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 68874.00 70.55 113.50 98.77 SNORD83A-201 snoRNA frontal cortex (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 1891.00 78.21 3.12 100.0 SNORD41-201 snoRNA frontal cortex (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 7.00 0.27 0.01 77.78 MT-TF-201 Mt tRNA frontal cortex (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 44.00 1.70 0.07 69.84 MT-TF-201 Mt tRNA frontal cortex (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 12.00 0.46 0.02 100.0 MT-TF-201 Mt tRNA frontal cortex (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 544.00 8.66 0.90 100.0 MT-TV-201 Mt tRNA frontal cortex (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 980.00 3.08 1.62 100.0 MT-RNR2-201 Mt rRNA frontal cortex (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 5066.00 15.93 8.35 92.58 MT-RNR2-201 Mt rRNA frontal cortex (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 79.00 0.25 0.13 100.0 MT-RNR2-201 Mt rRNA frontal cortex (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 73.00 0.23 0.12 100.0 MT-RNR2-201 Mt rRNA frontal cortex (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 4772.00 15.01 7.86 82.06 MT-RNR2-201 Mt rRNA frontal cortex (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 1322.00 4.16 2.18 100.0 MT-RNR2-201 Mt rRNA frontal cortex (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 34.00 0.11 0.06 100.0 MT-RNR2-201 Mt rRNA frontal cortex (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 565.00 16.49 0.93 100.0 MT-TI-201 Mt tRNA frontal cortex (Tissue)