ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 53.00 10.41 0.10 100.0 RNA5SP77-201 rRNA pseudogene cerebellum (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 29329.00 36.59 54.25 100.0 SNORD114-22-201 snoRNA cerebellum (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 47297.00 59.01 87.48 97.7 SNORD114-22-201 snoRNA cerebellum (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1698.00 5.40 3.14 100.0 SNORD6-201 snoRNA cerebellum (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 27320.00 86.83 50.53 100.0 SNORD6-201 snoRNA cerebellum (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 782.00 3.41 1.45 100.0 RNY3-201 misc RNA cerebellum (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 12304.49 15.20 22.76 48.19 SNORD82-201 snoRNA cerebellum (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 1531.00 1.89 2.83 100.0 SNORD82-201 snoRNA cerebellum (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 723.00 0.89 1.34 100.0 SNORD82-201 snoRNA cerebellum (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 7920.00 9.79 14.65 88.74 SNORD82-201 snoRNA cerebellum (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 1389.00 1.72 2.57 100.0 SNORD82-201 snoRNA cerebellum (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 34871.00 43.09 64.50 97.68 SNORD82-201 snoRNA cerebellum (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 13665.39 16.89 25.28 53.52 SNORD82-201 snoRNA cerebellum (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 17671.00 95.67 32.68 97.32 MIR146B-201 miRNA cerebellum (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 160.00 56.94 0.30 100.0 SNHG20-201 lncRNA cerebellum (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 546.00 19.12 1.01 100.0 ATP5MK-205 protein coding cerebellum (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 541.00 18.94 1.00 100.0 ATP5MK-205 protein coding cerebellum (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 86.00 22.34 0.16 100.0 LINC01556-201 lncRNA cerebellum (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 86.00 57.72 0.16 100.0 ATAD3A-202 protein coding cerebellum (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 4156.00 57.88 7.69 72.95 TMC5-202 protein coding cerebellum (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 54.00 70.13 0.10 100.0 ZMYM2-203 protein coding cerebellum (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 744.00 1.85 1.38 100.0 RNVU1-7-201 snRNA cerebellum (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 7822.00 68.64 14.47 100.0 SNORD24-201 snoRNA cerebellum (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 1016.00 51.50 1.88 100.0 Y_RNA.389-201 misc RNA cerebellum (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 339.00 0.52 0.63 100.0 SNORD101-201 snoRNA cerebellum (Tissue)