ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 26.00 0.15 0.05 100.0 LINC02739-203 lncRNA cerebellum (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 258.00 1.45 0.48 48.5 LINC02739-203 lncRNA cerebellum (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 2216.00 12.43 4.10 100.0 LINC02739-203 lncRNA cerebellum (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 3092.00 17.34 5.72 100.0 LINC02739-203 lncRNA cerebellum (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 3199.00 17.94 5.92 100.0 LINC02739-203 lncRNA cerebellum (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 274.00 1.54 0.51 51.5 LINC02739-203 lncRNA cerebellum (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 111973.00 92.20 207.11 100.0 MIR124-1HG-216 lncRNA cerebellum (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 538.00 21.76 1.00 100.0 SNHG10-212 lncRNA cerebellum (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 29721.22 44.52 54.97 46.98 SNHG19-202 lncRNA cerebellum (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 33686.90 50.46 62.31 64.76 SNHG19-202 lncRNA cerebellum (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 6.53 0.01 0.01 93.24 SNHG19-202 lncRNA cerebellum (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 1807.00 22.55 3.34 100.0 MIR222HG-206 lncRNA cerebellum (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 4589.00 57.26 8.49 86.93 MIR222HG-206 lncRNA cerebellum (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 137.00 1.71 0.25 100.0 MIR222HG-206 lncRNA cerebellum (Tissue)
ENST00000688371.3 ENST00000688371.3_458_485_+ 458–485 1.00 4.17 0.00 100.0 MIR302CHG-205 lncRNA cerebellum (Tissue)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 0.95 3.94 0.00 23.63 MIR302CHG-205 lncRNA cerebellum (Tissue)
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 2.28 9.50 0.00 57.0 MIR302CHG-205 lncRNA cerebellum (Tissue)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 3.00 12.50 0.01 100.0 MIR302CHG-205 lncRNA cerebellum (Tissue)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 3.00 12.50 0.01 100.0 MIR302CHG-205 lncRNA cerebellum (Tissue)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 6.00 25.00 0.01 100.0 MIR302CHG-205 lncRNA cerebellum (Tissue)
ENST00000688371.3 ENST00000688371.3_458_490_+ 458–490 1.00 4.17 0.00 100.0 MIR302CHG-205 lncRNA cerebellum (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 4.00 1.73 0.01 100.0 RPSA-216 retained intron cerebellum (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 2668.00 0.97 4.93 66.9 MIR99AHG-370 lncRNA cerebellum (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 263653.00 96.22 487.65 98.63 MIR99AHG-370 lncRNA cerebellum (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 1253.00 93.16 2.32 100.0 HPS4-237 retained intron cerebellum (Tissue)