ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 207137.00 29.95 383.12 92.9 SNHG14-315 lncRNA cerebellum (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 184001.00 26.61 340.33 88.58 SNHG14-315 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 2879.00 0.76 5.33 100.0 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 152666.79 40.52 282.37 48.73 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 445.00 0.12 0.82 100.0 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 586.00 0.16 1.08 100.0 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 181787.49 48.25 336.23 54.15 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 9789.00 2.60 18.11 86.6 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 173.00 0.05 0.32 100.0 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 3809.00 1.01 7.05 100.0 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 91.00 0.02 0.17 100.0 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 2.00 0.00 0.00 100.0 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 5424.00 1.44 10.03 98.1 SNHG5-273 lncRNA cerebellum (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 3461.00 2.66 6.40 66.72 SNHG14-323 lncRNA cerebellum (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 1244.00 0.25 2.30 64.29 MEG8-251 lncRNA cerebellum (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 890.00 0.18 1.65 51.99 MEG8-251 lncRNA cerebellum (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 474021.00 94.19 876.75 98.73 MEG8-251 lncRNA cerebellum (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 10446.00 2.08 19.32 88.06 MEG8-251 lncRNA cerebellum (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 652.00 0.13 1.21 100.0 MEG8-251 lncRNA cerebellum (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 49824.00 65.82 92.15 89.23 SNHG14-336 lncRNA cerebellum (Tissue)
ENST00000670697.1 ENST00000670697.1_226_313_+ 226–313 3.00 0.00 0.01 100.0 SNHG14-336 lncRNA cerebellum (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 21663.00 28.62 40.07 49.13 SNHG14-336 lncRNA cerebellum (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 35940.00 73.43 66.47 96.13 SNHG14-341 lncRNA cerebellum (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 1712.00 31.82 3.17 100.0 NCL-211 retained intron cerebellum (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 1016.00 10.62 1.88 100.0 FMN2-209 protein coding CDS not defined cerebellum (Tissue)