ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 354568.69 26.95 655.81 27.64 C19orf48P-203 retained intron cerebellum (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 11238.00 0.85 20.79 91.49 C19orf48P-203 retained intron cerebellum (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 274.00 0.02 0.51 100.0 C19orf48P-203 retained intron cerebellum (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 16.00 0.00 0.03 100.0 C19orf48P-203 retained intron cerebellum (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 130.00 84.97 0.24 100.0 ENST00000597420 lncRNA cerebellum (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 1136.00 14.23 2.10 100.0 RPS11-206 retained intron cerebellum (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 6123.00 76.68 11.33 100.0 RPS11-206 retained intron cerebellum (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 39432.00 57.92 72.93 60.21 CARMN-209 lncRNA cerebellum (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 1862.00 28.47 3.44 100.0 ENST00000602478 lncRNA cerebellum (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 12.00 12.50 0.02 100.0 PPFIA1P1-201 processed pseudogene cerebellum (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 4961.00 58.03 9.18 100.0 SNORD114-21-201 snoRNA cerebellum (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 1775.00 20.76 3.28 100.0 SNORD114-21-201 snoRNA cerebellum (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 24060.00 35.24 44.50 100.0 SNORD115-40-201 snoRNA cerebellum (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 33340.00 98.60 61.67 100.0 MIR98-201 miRNA cerebellum (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 35534.00 96.02 65.72 100.0 SNORD113-5-201 snoRNA cerebellum (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 6524.00 93.37 12.07 100.0 MIR15A-201 miRNA cerebellum (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 931.00 84.95 1.72 100.0 MIR376C-201 miRNA cerebellum (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 2177.00 60.78 4.03 100.0 SNHG21-206 retained intron cerebellum (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 217.00 33.91 0.40 100.0 SNORD11B-201 snoRNA cerebellum (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 3111.00 69.07 5.75 100.0 SNORD91B-201 snoRNA cerebellum (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 566.00 59.77 1.05 100.0 MIR219A2HG-201 lncRNA cerebellum (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 11035.00 50.62 20.41 69.59 SNORD91A-201 snoRNA cerebellum (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 27606.00 46.19 51.06 97.26 MIR486-1-201 miRNA cerebellum (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 28419.00 23.00 52.56 65.97 NOP56-219 retained intron cerebellum (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 1769.00 1.43 3.27 100.0 NOP56-219 retained intron cerebellum (Tissue)