ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 277.00 0.14 0.51 100.0 MT-TE-201 Mt tRNA cerebellum (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 180.00 0.09 0.33 100.0 MT-TE-201 Mt tRNA cerebellum (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 174920.00 85.33 323.53 92.14 MT-TE-201 Mt tRNA cerebellum (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 14.00 66.67 0.03 100.0 MIR196A1-201 miRNA cerebellum (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 125.00 1.05 0.23 100.0 MT-RNR1-201 Mt rRNA cerebellum (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 3980.00 33.49 7.36 100.0 MT-RNR1-201 Mt rRNA cerebellum (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 5308.00 80.96 9.82 100.0 MIR454-201 miRNA cerebellum (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 1976.00 63.95 3.65 100.0 MIR501-201 miRNA cerebellum (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 23115.00 91.48 42.75 100.0 MIR769-201 miRNA cerebellum (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 121.00 76.58 0.22 100.0 KRTAP19-1-201 protein coding cerebellum (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 766.00 23.86 1.42 100.0 MIR708-201 miRNA cerebellum (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 54.00 91.53 0.10 100.0 MIR509-3-201 miRNA cerebellum (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 156.00 50.81 0.29 100.0 MIR543-201 miRNA cerebellum (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 1990.00 95.81 3.68 100.0 MIR301B-201 miRNA cerebellum (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 2740.00 37.85 5.07 78.65 RNU1-82P-201 snRNA cerebellum (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 24.00 0.17 0.04 100.0 SNORD66-201 snoRNA cerebellum (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 4194.00 29.91 7.76 100.0 SNORD66-201 snoRNA cerebellum (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 3898.00 27.80 7.21 78.57 SNORD66-201 snoRNA cerebellum (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 907.00 6.47 1.68 100.0 SNORD66-201 snoRNA cerebellum (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 1274.00 76.56 2.36 100.0 U3.17-201 snoRNA cerebellum (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 3416.00 70.55 6.32 100.0 SNORD17-201 snoRNA cerebellum (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 277.00 55.29 0.51 100.0 SNORD72-201 snoRNA cerebellum (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 6346.00 80.88 11.74 100.0 SNORD70B-201 snoRNA cerebellum (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 26947.00 76.71 49.84 95.18 RNY4P18-201 misc RNA cerebellum (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 4580.00 4.85 8.47 45.52 SNORD90-201 snoRNA cerebellum (Tissue)