ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 8.00 0.09 0.01 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 56.00 0.61 0.10 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 773.00 8.41 1.34 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 67.00 0.73 0.12 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 87.00 0.95 0.15 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 1901.00 0.04 3.30 94.72 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 6141.00 0.12 10.66 67.8 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 3425.00 0.07 5.94 56.34 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 6284.00 38.49 10.91 54.56 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 3962.00 98.05 6.88 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 3337.00 62.54 5.79 91.8 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 238.00 94.82 0.41 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 101.00 0.07 0.18 90.18 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 11.00 0.01 0.02 9.82 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 97677.00 64.57 169.51 85.31 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 52744.54 31.03 91.53 34.83 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 1073.00 0.63 1.86 61.77 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 103321.24 60.78 179.30 64.81 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 434512.00 92.94 754.05 96.9 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 761.00 16.11 1.32 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 6518.00 46.68 11.31 83.02 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 62.00 0.01 0.11 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 315.00 0.03 0.55 70.95 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 1016.00 31.21 1.76 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA heart (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 99.00 4.37 0.17 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA heart (Tissue)